Good performance benchmark candidates for MD simulations

Submitted by Eric Stahlberg on Fri, 2007-05-11 14:46.
I'm involved with a group building a set of performance benchmarks for molecular simulations, starting first with molecular dynamics. What model problems would be recommended? What format should we use as the authority (or single copy) the defines the benchmark (including allowable parameters)? How big do the model problems need to be? Any of your input would be very useful in helping us focus on a set of representative benchmark problems.
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